CDS

Accession Number TCMCG006C59113
gbkey CDS
Protein Id XP_013720429.1
Location join(56406130..56406131,56406377..56407123,56407262..56407400,56407491..56407718)
Gene LOC106424219
GeneID 106424219
Organism Brassica napus

Protein

Length 371aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013864975.2
Definition probable pectate lyase 1 isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category G
Description Pectate lyase
KEGG_TC -
KEGG_Module -
KEGG_Reaction R02361        [VIEW IN KEGG]
R06240        [VIEW IN KEGG]
KEGG_rclass RC00049        [VIEW IN KEGG]
RC00705        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01728        [VIEW IN KEGG]
EC 4.2.2.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00040        [VIEW IN KEGG]
ko02024        [VIEW IN KEGG]
map00040        [VIEW IN KEGG]
map02024        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTGTAAGAAACCATACCGAGAGGAGGAAGCTGGGTTACTTTACTTGCGGAACAGGCAACCCCATCGACGATTGCTGGCGTTGCGATCGCAACTGGCACAAGAACCGCAAACGCCTAGCGGACTGCGGAATCGGGTTCGGAAGAAACGCGATCGGCGGTCGCGACGGGCGTTTCTACGTGGTCACTGACCCAAGTGACCACGACGCTGTTAACCCTAGACCGGGTACATTACGTCACGCCGTGATCCAAGACCGACCGCTATGGATCGTTTTCAAACGTGATATGGTGATTCAGCTAAAACAAGAGCTCATCGTTAACAGCTTCAAAACCATCGACGGACGTGGCGCAAACGTTCACATCGCTAACGGCGGTTGCATAACGATTCAGTTTGTGACGAACGTTATAGTCCATGGATTGCATATTCATGACTGTAGACCGACCGGGAACGCTATGGTGAGAAGCTCGGAGACGCATTTTGGGTGGAGGACGATGGCGGATGGTGACGCGATTTCGATTTTCGAGTCGAGTCATGTTTGGATTGATCACAACTCGTTGTCTCATTGCGCTGATGGGCTTGTGGATGCAGTCATGGGCTCGACGGCCATTACCATCTCTAACAACCACATGACTCACCACAACGAGGTTATGTTGCTCGGACATAGTGATTCTTATACGGAGGATAGAGCTATGCAAGTTACCATAGCTTATAACCATTTTGGGGTCGGACTTATTCAAAGAATGCCAAGGTGTCGACATGGTTATTTCCATGTCGTGAACAATGACTACACTCACTGGGAGATGTACGCCATCGGTGGAAGCGCAAACCCGACAATTAACAGTCAAGGAAACCGCTACGCCGCTCCTAAAAATCCTTTTGCTAAAGAGGTGACAAAGAGAGTGGACACACCGGCGAGTCACTGGAAAGGATGGAACTGGAGATCGGAAGGAGACTTGCTTCAGAACGGAGCTTACTTCACTTCTTCAGGAGCCGCTGCATCTGGCAGCTACGCACGTGCATCTAGCCTCGCCGCTAAATCTTCTTCATTGGTTGCAACCATTACTTCTGACGCTGGAGCTCTACCTTGTCGCAGAGGTAGTCAATGTTCCTCGTAG
Protein:  
MSVRNHTERRKLGYFTCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPSDHDAVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHDCRPTGNAMVRSSETHFGWRTMADGDAISIFESSHVWIDHNSLSHCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSDSYTEDRAMQVTIAYNHFGVGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEVTKRVDTPASHWKGWNWRSEGDLLQNGAYFTSSGAAASGSYARASSLAAKSSSLVATITSDAGALPCRRGSQCSS